STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82885.1Uracil-DNA glycosylase superfamily; InterPro IPR002198:IPR005122; KEGG: dat:HRM2_39870 SmuG; PFAM: Uracil-DNA glycosylase superfamily; SPTR: SmuG; PFAM: Uracil DNA glycosylase superfamily. (244 aa)    
Predicted Functional Partners:
ADK82884.1
Adenylate/guanylate cyclase with Chase sensor; COGs: COG2114 Adenylate cyclase family 3 (some protein contain HAMP domain); InterPro IPR001901:IPR001054:IPR007890; KEGG: tde:TDE0932 adenylate/guanylate cyclase catalytic domain-containing protein; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; CHASE2 domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; SPTR: Adenylate/guanylate cyclase catalytic domain protein; PFAM: Adenylate and Guanylate cyclase catalytic domain; CHASE2 domain.
       0.757
ADK82889.1
HAD-superfamily subfamily IB hydrolase, TIGR01490; COGs: COG0560 Phosphoserine phosphatase; InterPro IPR006385; KEGG: mab:MAB_0431c hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like.
  
  
 0.694
ADK82886.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR000629:IPR014001:IPR001650:IPR011545:IPR 014021:IPR014014; KEGG: dal:Dalk_2316 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase DbpA; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
     
 0.692
ADK82888.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: tro:trd_0439 acyltransferase domain protein; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Acyltransferase domain protein; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.662
ADK82891.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: cbt:CLH_3257 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.658
ADK82890.1
Carbohydrate kinase, FGGY; COGs: COG0554 Glycerol kinase; InterPro IPR018483:IPR018484:IPR018485; KEGG: lic:LIC10629 glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Glycerol kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; Belongs to the FGGY kinase family.
       0.654
ADK82887.1
Diacylglycerol kinase catalytic region; COGs: COG1597 Sphingosine kinase; InterPro IPR001206:IPR005218; KEGG: rca:Rcas_2760 diacylglycerol kinase catalytic region; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; SPTR: Diacylglycerol kinase catalytic region; PFAM: Diacylglycerol kinase catalytic domain; TIGRFAM: conserved protein of unknown function cotranscribed with Bmr (bmrU).
       0.651
ADK83101.1
Biotin/lipoyl attachment domain-containing protein; COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891:IPR000089:IPR001882; KEGG: dsa:Desal_0778 biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; SPTR: Biotin/lipoyl attachment domain-containing protein; PFAM: HMGL-like; Conserved carboxylase domain; Biotin-requiring enzyme.
  
    0.587
ADK82892.1
Hypothetical protein; KEGG: min:Minf_2394 dTDP-glucose pyrophosphorylase; SPTR: Glucose-1-phosphate thymidylyltransferase.
       0.573
ADK79259.1
NUDIX hydrolase; InterPro IPR000086:IPR020084; KEGG: dat:HRM2_01950 MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); PFAM: NUDIX hydrolase; SPTR: MutT family protein, putative 78-dihydro-8-oxoguanine triphosphatase (8-oxo-dGTPase); PFAM: NUDIX domain.
 
     0.520
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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