STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82939.1Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: sme:SM_b21221 putative sugar uptake ABC transporter periplasmic solute-binding protein precursor; PFAM: extracellular solute-binding protein family 1; SPTR: ABC sugar transporter, periplasmic ligand binding protein; PFAM: Bacterial extracellular solute-binding protein. (430 aa)    
Predicted Functional Partners:
ADK82937.1
COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: tit:Thit_0424 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.653
ADK82938.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tex:Teth514_0396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Sugar ABC transporter, permease protein; manually curated; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.652
ADK82424.1
ADP-ribosylation/Crystallin J1; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: gym:GYMC10_4315 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylation/Crystallin J1; PFAM: ADP-ribosylglycohydrolase.
  
     0.592
ADK82363.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cbe:Cbei_2894 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.587
ADK82498.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: dde:Dde_3658 glucose transport system permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Glucose transport system permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.562
ADK81213.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: bja:bll2731 ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Carbohydrate ABC transporter substrate-binding protein, CUT1 family; PFAM: Bacterial extracellular solute-binding protein.
  
     0.554
ADK79867.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: gyc:GYMC61_2959 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: ABC transporter (Substrate-binding protein); PFAM: Bacterial extracellular solute-binding protein.
  
     0.515
ADK81520.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: cce:Ccel_3246 extracellular solute-binding protein family 1; PFAM: extracellular solute-binding protein family 1; SPTR: Putative uncharacterized protein; PFAM: Bacterial extracellular solute-binding protein.
  
     0.508
ADK81377.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: smd:Smed_4557 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding protein.
  
     0.504
ADK82362.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: cbe:Cbei_2893 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.502
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.