STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82958.1COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: ddc:Dd586_0844 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component. (278 aa)    
Predicted Functional Partners:
ADK82959.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: hch:HCH_03297 ABC-type sugar transport system, permease components; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC-type sugar transport system, permease components; PFAM: Binding-protein-dependent transport system inner membrane component.
   0.961
ADK82960.1
Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059; KEGG: hch:HCH_03296 ABC-type sugar transport system, periplasmic component; PFAM: extracellular solute-binding protein family 1; SPTR: ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
 
   0.887
ADK79940.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tit:Thit_0425 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.843
ADK82453.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: pmo:Pmob_0306 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
   0.841
ADK80751.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: pmo:Pmob_0306 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.838
ADK79531.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rec:RHECIAT_PC0000130 probable sugar ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Transport protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.831
ADK79868.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rle:RL2748 putative transmembrane component of ABC transporter; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
   0.828
ADK80228.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: tex:Teth514_0396 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.822
ADK82686.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: rfr:Rfer_0953 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
   0.816
ADK83175.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: gym:GYMC10_1297 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative uncharacterized protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
   0.815
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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