STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK82983.1Hypothetical protein; KEGG: cpr:CPR_0311 calcium-translocating P-type ATPase, PMCA-type; SPTR: PX. (129 aa)    
Predicted Functional Partners:
ADK82984.1
Cell wall/surface repeat protein; InterPro IPR002345:IPR013378:IPR019501; KEGG: slg:SLGD_00154 hypothetical protein; PFAM: Listeria/Bacterioides repeat protein; Peptidase M30, hyicolysin; SPTR: Putative uncharacterized protein; TIGRFAM: cell wall/surface repeat protein; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); Peptidase M30; TIGRFAM: Listeria/Bacterioides repeat.
       0.773
ADK82982.1
KEGG: oaa:100074041 hypothetical protein LOC100074041; SPTR: Putative uncharacterized protein.
       0.655
ADK82985.1
Peptidase M48 Ste24p; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ace:Acel_1421 peptidase M48, Ste24p; PFAM: peptidase M48 Ste24p; SPTR: Peptidase M48, Ste24p; PFAM: Peptidase family M48.
       0.425
ADK82986.1
GTP-binding protein TypA; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000795:IPR004161:IPR000640:IPR005225:IPR 006298; KEGG: dsa:Desal_3190 GTP-binding protein TypA; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain protein; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain.
       0.425
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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