STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK83004.1Amidohydrolase; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; InterPro IPR006680; KEGG: nth:Nther_1148 N-ethylammeline chlorohydrolase; PFAM: amidohydrolase; SPTR: Amidohydrolase; PFAM: Amidohydrolase family. (440 aa)    
Predicted Functional Partners:
ADK81401.1
Purine or other phosphorylase family 1; COGs: COG0775 Nucleoside phosphorylase; InterPro IPR000845; KEGG: cff:CFF8240_1515 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; PFAM: purine or other phosphorylase family 1; SPTR: MTA/SAH nucleosidase; PFAM: Phosphorylase superfamily.
    
 0.907
ADK83005.1
COGs: COG2820 Uridine phosphorylase; InterPro IPR018016:IPR000845; KEGG: str:Sterm_0544 purine or other phosphorylase family 1; PFAM: purine or other phosphorylase family 1; SPTR: Putative uncharacterized protein; PFAM: Phosphorylase superfamily; TIGRFAM: uridine phosphorylase.
     
 0.789
ADK83003.1
COGs: COG1957 Inosine-uridine nucleoside N-ribohydrolase; InterPro IPR015910:IPR001910; KEGG: lba:Lebu_1571 purine nucleosidase; PFAM: Inosine/uridine-preferring nucleoside hydrolase; SPTR: Putative uncharacterized protein; PFAM: Inosine-uridine preferring nucleoside hydrolase.
  
  
 0.709
ADK83006.1
Major facilitator superfamily MFS_1; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: spq:SPAB_01973 hypothetical protein; PFAM: major facilitator superfamily MFS_1; SPTR: MFS family major facilitator transporter; PFAM: Major Facilitator Superfamily.
       0.658
ADK83007.1
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: gym:GYMC10_6248 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
       0.658
ADK83008.1
ABC transporter related protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR017871:IPR003593:IPR003439; KEGG: gym:GYMC10_6247 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
       0.658
ADK83009.1
COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: gym:GYMC10_6246 cobalt transport protein; PFAM: cobalt transport protein; SPTR: Putative uncharacterized protein; PFAM: Cobalt transport protein.
       0.658
ADK83010.1
Signal transduction histidine kinase, LytS; KEGG: lba:Lebu_0306 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1393).
       0.454
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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