STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK83120.1COGs: COG1692 conserved hypothetical protein; KEGG: tde:TDE1535 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein TIGR00282. (271 aa)    
Predicted Functional Partners:
ADK83121.1
COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: ypb:YPTS_3005 SoxR reducing system protein RseC; PFAM: Positive regulator of sigma(E) RseC/MucC; SPTR: Sigma E factor regulatory protein; PFAM: Positive regulator of sigma(E), RseC/MucC.
       0.787
ADK83119.1
Heat shock protein Hsp20; InterPro IPR002068; KEGG: dde:Dde_2798 small HspC2 heat shock protein; PFAM: heat shock protein Hsp20; SPTR: Small HspC2 heat shock protein; PFAM: Hsp20/alpha crystallin family; Belongs to the small heat shock protein (HSP20) family.
       0.518
ADK83118.1
Hypothetical protein.
       0.500
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.