STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK83146.1ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dhd:Dhaf_3900 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter. (231 aa)    
Predicted Functional Partners:
ADK83145.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: dhd:Dhaf_3901 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.977
ADK83149.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: drm:Dred_2780 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: ABC superfamily ATP binding cassette transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.942
ADK82249.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: cbl:CLK_0812 putative ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative ABC transporter, permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.912
ADK82792.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: drm:Dred_1575 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.912
ADK83144.1
Conserved hypothetical protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: dhd:Dhaf_3902 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: NMT1/THI5 like.
 
  
 0.908
ADK82904.1
Binding-protein-dependent transport systems inner membrane component; COGs: COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system permease component; InterPro IPR000515; KEGG: mno:Mnod_0055 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
  
 0.878
ADK83147.1
Cupin 2 conserved barrel domain protein; InterPro IPR013096; KEGG: cco:CCC13826_0495 5'-nucleotidase SurE; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Cupin 2 domain-containing protein; PFAM: Cupin domain.
       0.781
ADK82790.1
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; InterPro IPR001638:IPR015168:IPR010067; KEGG: dat:HRM2_01560 ABC-type transporter, substrate-binding protein; PFAM: NMT1/THI5 like domain protein; SMART: extracellular solute-binding protein family 3; SPTR: Putative ABC transporter, substrate-binding protein, aliphatic sulphonates; TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; PFAM: NMT1/THI5 like; TIGRFAM: ABC transport [...]
 
  
 0.764
ADK82396.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cts:Ctha_0502 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
      0.755
ADK83148.1
ABC transporter related protein; COGs: COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: dae:Dtox_2282 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Taurine ABC transporter, ATP-binding protein; PFAM: ABC transporter.
 
    
0.629
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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