STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK83253.1KEGG: tde:TDE0356 hypothetical protein; SPTR: Putative uncharacterized protein. (152 aa)    
Predicted Functional Partners:
ADK80903.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR020471:IPR001395; KEGG: str:Sterm_3498 2,5-didehydrogluconate reductase; PFAM: aldo/keto reductase; SPTR: Putative uncharacterized protein; PFAM: Aldo/keto reductase family.
    0.758
ADK83256.1
Cupin 2 conserved barrel domain protein; COGs: COG1917 conserved hypothetical protein contains double-stranded beta-helix domain; InterPro IPR013096; KEGG: mmp:MMP0486 hypothetical protein; PFAM: Cupin 2 conserved barrel domain protein; SPTR: Putative uncharacterized protein; PFAM: Cupin domain.
 
     0.587
ADK83254.1
Transcriptional regulator, CdaR; COGs: COG3835 Sugar diacid utilization regulator; InterPro IPR008599; KEGG: sfr:Sfri_2640 transcriptional regulator, CdaR; PFAM: sugar diacid recognition domain protein; SPTR: Putative uncharacterized protein; PFAM: Putative sugar diacid recognition.
       0.505
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.