STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK83281.1Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: yen:YE2753 putative branched-chain amino acid transport system, permease component; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component. (337 aa)    
Predicted Functional Partners:
ADK83283.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: dsh:Dshi_0531 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative uncharacterized protein; PFAM: family.
 
 0.915
ADK83282.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003439:IPR017871:IPR003593; KEGG: nca:Noca_3319 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
 0.894
ADK83280.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dsh:Dshi_0528 ribose/xylose/arabinose/galactoside ABC-type transport system protein; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
    
0.837
ADK83279.1
6-phospho-3-hexuloisomerase; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347; KEGG: lbr:LVIS_0443 sugar phosphate isomerase; PFAM: sugar isomerase (SIS); PRIAM: 6-phospho-3-hexuloisomerase; SPTR: Putative uncharacterized protein; PFAM: SIS domain; TIGRFAM: 6-phospho 3-hexuloisomerase.
 
     0.793
ADK79372.1
ABC transporter, substrate-binding protein; COGs: COG1879 ABC-type sugar transport system periplasmic component; KEGG: cro:ROD_24811 ABC transporter, substrate-binding protein; SPTR: ABC transporter, substrate-binding protein; PFAM: family.
 
 0.790
ADK79969.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: dtu:Dtur_0412 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: Putative uncharacterized protein; PFAM: Branched-chain amino acid transport system / permease component.
  
     0.752
ADK80301.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: rxy:Rxyl_1890 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
 
 0.717
ADK80394.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: rhi:NGR_c17380 putative ribose transport system, substrate-binding protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Putative ribose transport system, substrate-binding protein; PFAM: family.
 
 0.598
ADK82132.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: gtn:GTNG_1813 D-ribose-binding periplasmic protein; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: D-ribose-binding periplasmic protein; PFAM: family.
 
 0.597
ADK81753.1
Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: cpy:Cphy_3277 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: Periplasmic binding protein/LacI transcriptional regulator; PFAM: family.
 
 0.583
Your Current Organism:
Sediminispirochaeta smaragdinae
NCBI taxonomy Id: 573413
Other names: S. smaragdinae DSM 11293, Sediminispirochaeta smaragdinae DSM 11293, Spirochaeta smaragdinae DSM 11293
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