STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH73192.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SHH73160.1
Hypothetical protein.
 
     0.727
SHH73226.1
Hypothetical protein.
 
     0.688
SHH73130.1
Hypothetical protein.
 
    
0.606
SHH73259.1
Cytochrome c peroxidase.
 
     0.571
SHH73293.1
Hypothetical protein.
 
     0.551
SHH73066.1
Conserved repeat domain-containing protein/gliding motility-associated C-terminal domain-containing protein.
 
     0.426
SHI20030.1
Starch-binding associating with outer membrane.
  
     0.425
SHH73102.1
Type IX secretion system membrane protein, PorP/SprF family.
       0.405
SHH79677.1
Hypothetical protein.
  
     0.402
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.