STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH83068.1Azurin. (170 aa)    
Predicted Functional Partners:
SHI07092.1
Hypothetical protein.
    
 
 0.813
SHH83100.1
Hypothetical protein.
       0.579
SHH83129.1
Putative membrane protein.
       0.576
SHI08097.1
MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor.
   
    0.487
SHH82967.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.476
SHI01776.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.451
SHH83039.1
Alpha,alpha-trehalase.
       0.417
SHI02753.1
Molybdopterin synthase sulfur carrier subunit.
  
     0.412
SHH82909.1
Sugar phosphate isomerase/epimerase.
  
     0.409
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.