STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI13475.1Putative membrane protein. (169 aa)    
Predicted Functional Partners:
SHH76857.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.760
SHH90725.1
Hypothetical protein.
  
     0.703
SHI04085.1
Hypothetical protein.
  
     0.663
SHH42122.1
Putative membrane protein.
  
     0.652
SHH51987.1
Hypothetical protein.
  
     0.652
SHI24379.1
Putative signal transducing protein.
  
     0.622
SHI20778.1
Hypothetical protein.
  
     0.618
SHI17417.1
Hypothetical protein.
  
     0.616
SHI17825.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.600
SHH82967.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.593
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.