STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI14773.1Type IX secretion system membrane protein, PorP/SprF family. (329 aa)    
Predicted Functional Partners:
SHH78653.1
Protein involved in gliding motility SprE.
  
   
 0.763
SHH82175.1
Putative DNA-binding domain-containing protein.
  
     0.729
SHH85756.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
  
  
  0.699
SHI14836.1
Hypothetical protein.
  
     0.699
SHI23352.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.698
SHH78940.1
Hypothetical protein.
  
     0.690
SHH38814.1
Hypothetical protein.
  
     0.687
SHH86461.1
Protein of unknown function.
  
     0.684
SHI20592.1
Hypothetical protein.
  
     0.682
SHI23812.1
Family of unknown function.
  
     0.667
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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