STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI15263.1Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. (389 aa)    
Predicted Functional Partners:
SHI15253.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
 0.999
SHI15234.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 0.971
SHI23948.1
Aldose 1-epimerase.
  
 0.925
SHH47654.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.904
SHI15198.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.897
SHH88670.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
 0.895
SHI15244.1
Transcriptional regulator, LacI family.
  
  
 0.767
SHH47780.1
L-ribulose 5-phosphate 4-epimerase.
    
 0.517
SHH35940.1
Tat (twin-arginine translocation) pathway signal sequence.
   
 0.510
SHH37161.1
Predicted dehydrogenase.
   
 0.510
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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