STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI16763.1D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (330 aa)    
Predicted Functional Partners:
SHI14469.1
Allosteric NADP-dependent malic enzyme.
   
 0.939
SHH81770.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.927
SHH59308.1
L-lactate dehydrogenase (cytochrome).
  
 
 0.921
SHI06690.1
Glyoxylase, beta-lactamase superfamily II.
  
 0.905
SHH43872.1
Acetolactate synthase, large subunit.
  
 
 0.899
SHH43831.1
Acetolactate synthase, small subunit.
    
  0.895
SHH42930.1
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.893
leuC
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
    
 0.891
SHI23942.1
FAD/FMN-containing dehydrogenase.
   
 0.890
SHH91121.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 
 0.886
Your Current Organism:
Leeuwenhoekiella palythoae
NCBI taxonomy Id: 573501
Other names: DSM 19859, KCTC 22020, KMM 6264, L. palythoae, LMG 24856, LMG:24856, Leeuwenhoekiella palythoae Nedashkovskaya et al. 2009, Leeuwenhoekiella sp. KMM 6264
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