Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI20056.1 | SHI20061.1 | SAMN04487999_2705 | SAMN04487999_2706 | Altronate hydrolase. | Tagaturonate reductase. | 0.995 |
SHI20056.1 | SHI20069.1 | SAMN04487999_2705 | SAMN04487999_2707 | Altronate hydrolase. | TRAP transporter, DctM subunit. | 0.690 |
SHI20056.1 | SHI20086.1 | SAMN04487999_2705 | SAMN04487999_2710 | Altronate hydrolase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.778 |
SHI20056.1 | SHI20093.1 | SAMN04487999_2705 | SAMN04487999_2711 | Altronate hydrolase. | 2-dehydro-3-deoxygluconokinase. | 0.977 |
SHI20056.1 | SHI26114.1 | SAMN04487999_2705 | SAMN04487999_3346 | Altronate hydrolase. | Fructokinase. | 0.536 |
SHI20056.1 | kduI | SAMN04487999_2705 | SAMN04487999_2714 | Altronate hydrolase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.742 |
SHI20056.1 | uxaC | SAMN04487999_2705 | SAMN04487999_2712 | Altronate hydrolase. | D-glucuronate isomerase. | 0.882 |
SHI20056.1 | uxuA | SAMN04487999_2705 | SAMN04487999_2097 | Altronate hydrolase. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.815 |
SHI20056.1 | uxuA-2 | SAMN04487999_2705 | SAMN04487999_2697 | Altronate hydrolase. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.816 |
SHI20061.1 | SHI20056.1 | SAMN04487999_2706 | SAMN04487999_2705 | Tagaturonate reductase. | Altronate hydrolase. | 0.995 |
SHI20061.1 | SHI20069.1 | SAMN04487999_2706 | SAMN04487999_2707 | Tagaturonate reductase. | TRAP transporter, DctM subunit. | 0.781 |
SHI20061.1 | SHI20086.1 | SAMN04487999_2706 | SAMN04487999_2710 | Tagaturonate reductase. | 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase. | 0.866 |
SHI20061.1 | SHI20093.1 | SAMN04487999_2706 | SAMN04487999_2711 | Tagaturonate reductase. | 2-dehydro-3-deoxygluconokinase. | 0.911 |
SHI20061.1 | SHI26100.1 | SAMN04487999_2706 | SAMN04487999_3344 | Tagaturonate reductase. | Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family. | 0.896 |
SHI20061.1 | SHI26114.1 | SAMN04487999_2706 | SAMN04487999_3346 | Tagaturonate reductase. | Fructokinase. | 0.900 |
SHI20061.1 | kduI | SAMN04487999_2706 | SAMN04487999_2714 | Tagaturonate reductase. | 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. | 0.877 |
SHI20061.1 | uxaC | SAMN04487999_2706 | SAMN04487999_2712 | Tagaturonate reductase. | D-glucuronate isomerase. | 0.993 |
SHI20061.1 | uxuA | SAMN04487999_2706 | SAMN04487999_2097 | Tagaturonate reductase. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.819 |
SHI20061.1 | uxuA-2 | SAMN04487999_2706 | SAMN04487999_2697 | Tagaturonate reductase. | D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate. | 0.819 |
SHI20069.1 | SHI20056.1 | SAMN04487999_2707 | SAMN04487999_2705 | TRAP transporter, DctM subunit. | Altronate hydrolase. | 0.690 |
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