Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH59946.1 | SHI21826.1 | SAMN04487999_0607 | SAMN04487999_2918 | RteC protein. | Helix-turn-helix domain-containing protein. | 0.764 |
SHH59946.1 | SHI21832.1 | SAMN04487999_0607 | SAMN04487999_2919 | RteC protein. | Hypothetical protein. | 0.568 |
SHH59946.1 | SHI21840.1 | SAMN04487999_0607 | SAMN04487999_2920 | RteC protein. | Hypothetical protein. | 0.765 |
SHH59946.1 | SHI21883.1 | SAMN04487999_0607 | SAMN04487999_2926 | RteC protein. | Hypothetical protein. | 0.652 |
SHH59946.1 | SHI21918.1 | SAMN04487999_0607 | SAMN04487999_2930 | RteC protein. | Hypothetical protein. | 0.651 |
SHH59946.1 | SHI26701.1 | SAMN04487999_0607 | SAMN04487999_3399 | RteC protein. | Hypothetical protein. | 0.468 |
SHH59946.1 | SHI26710.1 | SAMN04487999_0607 | SAMN04487999_3400 | RteC protein. | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | 0.639 |
SHH59946.1 | SHI26984.1 | SAMN04487999_0607 | SAMN04487999_3427 | RteC protein. | Hypothetical protein. | 0.572 |
SHI21820.1 | SHI21826.1 | SAMN04487999_2917 | SAMN04487999_2918 | RteC protein. | Helix-turn-helix domain-containing protein. | 0.848 |
SHI21820.1 | SHI21832.1 | SAMN04487999_2917 | SAMN04487999_2919 | RteC protein. | Hypothetical protein. | 0.857 |
SHI21820.1 | SHI21840.1 | SAMN04487999_2917 | SAMN04487999_2920 | RteC protein. | Hypothetical protein. | 0.856 |
SHI21820.1 | SHI21883.1 | SAMN04487999_2917 | SAMN04487999_2926 | RteC protein. | Hypothetical protein. | 0.712 |
SHI21820.1 | SHI21918.1 | SAMN04487999_2917 | SAMN04487999_2930 | RteC protein. | Hypothetical protein. | 0.755 |
SHI21820.1 | SHI26701.1 | SAMN04487999_2917 | SAMN04487999_3399 | RteC protein. | Hypothetical protein. | 0.729 |
SHI21820.1 | SHI26710.1 | SAMN04487999_2917 | SAMN04487999_3400 | RteC protein. | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | 0.743 |
SHI21820.1 | SHI26984.1 | SAMN04487999_2917 | SAMN04487999_3427 | RteC protein. | Hypothetical protein. | 0.711 |
SHI21826.1 | SHH59946.1 | SAMN04487999_2918 | SAMN04487999_0607 | Helix-turn-helix domain-containing protein. | RteC protein. | 0.764 |
SHI21826.1 | SHI21820.1 | SAMN04487999_2918 | SAMN04487999_2917 | Helix-turn-helix domain-containing protein. | RteC protein. | 0.848 |
SHI21826.1 | SHI21832.1 | SAMN04487999_2918 | SAMN04487999_2919 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.952 |
SHI21826.1 | SHI21840.1 | SAMN04487999_2918 | SAMN04487999_2920 | Helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.953 |
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