Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH37554.1 | SHH78763.1 | SAMN04487999_0043 | SAMN04487999_0912 | Glutamate synthase (NADH) large subunit. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.899 |
| SHH37554.1 | SHI05766.1 | SAMN04487999_0043 | SAMN04487999_1862 | Glutamate synthase (NADH) large subunit. | 3-hydroxyacyl-CoA dehydrogenase. | 0.587 |
| SHH37554.1 | SHI26867.1 | SAMN04487999_0043 | SAMN04487999_3408 | Glutamate synthase (NADH) large subunit. | L-fucose dehydrogenase. | 0.811 |
| SHH37554.1 | SHI26880.1 | SAMN04487999_0043 | SAMN04487999_3410 | Glutamate synthase (NADH) large subunit. | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.418 |
| SHH78763.1 | SHH37554.1 | SAMN04487999_0912 | SAMN04487999_0043 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | Glutamate synthase (NADH) large subunit. | 0.899 |
| SHH78763.1 | SHI05766.1 | SAMN04487999_0912 | SAMN04487999_1862 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 3-hydroxyacyl-CoA dehydrogenase. | 0.860 |
| SHH78763.1 | SHI26867.1 | SAMN04487999_0912 | SAMN04487999_3408 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-fucose dehydrogenase. | 0.720 |
| SHH78763.1 | SHI26874.1 | SAMN04487999_0912 | SAMN04487999_3409 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | L-fuconolactonase. | 0.793 |
| SHH78763.1 | SHI26880.1 | SAMN04487999_0912 | SAMN04487999_3410 | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.831 |
| SHI05766.1 | SHH37554.1 | SAMN04487999_1862 | SAMN04487999_0043 | 3-hydroxyacyl-CoA dehydrogenase. | Glutamate synthase (NADH) large subunit. | 0.587 |
| SHI05766.1 | SHH78763.1 | SAMN04487999_1862 | SAMN04487999_0912 | 3-hydroxyacyl-CoA dehydrogenase. | ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.860 |
| SHI05766.1 | SHI26867.1 | SAMN04487999_1862 | SAMN04487999_3408 | 3-hydroxyacyl-CoA dehydrogenase. | L-fucose dehydrogenase. | 0.805 |
| SHI05766.1 | SHI26880.1 | SAMN04487999_1862 | SAMN04487999_3410 | 3-hydroxyacyl-CoA dehydrogenase. | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.572 |
| SHI05766.1 | lpxC | SAMN04487999_1862 | SAMN04487999_1657 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.566 |
| SHI26114.1 | SHI26867.1 | SAMN04487999_3346 | SAMN04487999_3408 | Fructokinase. | L-fucose dehydrogenase. | 0.892 |
| SHI26114.1 | SHI26880.1 | SAMN04487999_3346 | SAMN04487999_3410 | Fructokinase. | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.671 |
| SHI26851.1 | SHI26859.1 | SAMN04487999_3406 | SAMN04487999_3407 | L-rhamnose mutarotase. | MFS transporter, FHS family, L-fucose permease. | 0.937 |
| SHI26851.1 | SHI26867.1 | SAMN04487999_3406 | SAMN04487999_3408 | L-rhamnose mutarotase. | L-fucose dehydrogenase. | 0.950 |
| SHI26851.1 | SHI26874.1 | SAMN04487999_3406 | SAMN04487999_3409 | L-rhamnose mutarotase. | L-fuconolactonase. | 0.957 |
| SHI26851.1 | SHI26880.1 | SAMN04487999_3406 | SAMN04487999_3410 | L-rhamnose mutarotase. | 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase. | 0.904 |
page 1 of 3