STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_08950Uncharacterized protein. (360 aa)    
Predicted Functional Partners:
SI65_05104
Elongation factor 3.
   
 
 0.990
SI65_03317
Uncharacterized protein.
   
   0.989
SI65_03035
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
  
 0.977
SI65_08009
54S ribosomal protein L23, mitochondrial.
  
 0.974
SI65_07962
Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.
  
 0.973
SI65_07704
60S ribosomal protein L5.
  
 0.972
SI65_01161
60S ribosomal protein L25.
  
 0.972
SI65_02404
60S ribosomal protein L7.
  
 0.971
SI65_07021
Uncharacterized protein; Belongs to the universal ribosomal protein uL6 family.
  
 0.970
SI65_05643
37S ribosomal protein MRP2, mitochondrial.
  
 
 0.965
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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