STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_08042VPS9 domain-containing protein. (730 aa)    
Predicted Functional Partners:
SI65_02601
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.921
SI65_00304
Uncharacterized protein.
    
 
0.863
SI65_05838
Uncharacterized protein.
    
 0.861
SI65_01797
GTP-binding protein ypt5.
    
 0.861
SI65_04637
Uncharacterized protein.
    
 0.858
SI65_02604
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.805
SI65_01018
Putative 26S proteasome regulatory subunit rpn6.
    
  0.678
SI65_05800
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.675
SI65_05124
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.665
SI65_01515
Ubiquitin-like domain-containing protein.
    
  0.660
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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