STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_06127Zn(2)-C6 fungal-type domain-containing protein. (855 aa)    
Predicted Functional Partners:
SI65_01813
Uncharacterized protein.
    
 0.610
SI65_03175
Uncharacterized protein.
    
 0.597
SI65_09727
Crossover junction endonuclease mus81.
    
 0.592
SI65_04485
DNA polymerase.
    
 0.583
SI65_10033
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.553
SI65_03973
Histone acetyltransferase type B subunit 2.
    
  0.547
SI65_06808
ANK_REP_REGION domain-containing protein.
    
  0.544
SI65_03360
ANK_REP_REGION domain-containing protein.
    
  0.544
SI65_09593
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
    
  0.543
SI65_04083
ERCC4 domain-containing protein.
    
 0.527
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.