STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_05533Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
SI65_03033
Ankyrin repeat protein nuc-2.
    
 0.964
SI65_06720
Uncharacterized protein.
    
 0.844
SI65_05595
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.823
SI65_09070
ATP-dependent DNA helicase II subunit 1.
    
 0.743
SI65_06762
DNA ligase.
    
 0.734
SI65_04277
DNA_LIGASE_A3 domain-containing protein.
    
 0.734
SI65_07139
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.644
SI65_05224
Protein kinase domain-containing protein.
    
 0.644
SI65_04912
Negative regulator of the PHO system; Belongs to the protein kinase superfamily.
    
 0.644
SI65_03716
SPX domain-containing protein.
    
 0.614
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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