STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_03864UBIQUITIN_CONJUGAT_2 domain-containing protein. (218 aa)    
Predicted Functional Partners:
SI65_04590
Ubiquitin-activating enzyme E1 1; Belongs to the ubiquitin-activating E1 family.
   
 0.984
SI65_01148
E3 ubiquitin-protein ligase RBX1.
    
 0.978
SI65_01515
Ubiquitin-like domain-containing protein.
   
 0.972
SI65_07044
HECT domain-containing protein.
    
 0.955
SI65_07695
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.950
SI65_05891
Ubiquitin-40S ribosomal protein S27a.
    
 0.948
SI65_03015
BZIP domain-containing protein.
    
 0.948
SI65_07117
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.941
SI65_07651
AN1-type domain-containing protein.
   
 0.913
SI65_03104
E3 ubiquitin ligase complex SCF subunit sconC; Belongs to the SKP1 family.
    
 0.910
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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