Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SI65_00343 | SI65_01366 | A0A1E3BP59 | A0A1E3BSC6 | Histidine--tRNA ligase. | AA_TRNA_LIGASE_II domain-containing protein. | 0.871 |
SI65_00343 | SI65_02975 | A0A1E3BP59 | A0A1E3BMG7 | Histidine--tRNA ligase. | Uncharacterized protein. | 0.814 |
SI65_00343 | SI65_04486 | A0A1E3BP59 | A0A1E3BEW3 | Histidine--tRNA ligase. | Protein kinase domain-containing protein. | 0.778 |
SI65_00343 | SI65_04521 | A0A1E3BP59 | A0A1E3BF33 | Histidine--tRNA ligase. | tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.599 |
SI65_00343 | SI65_04779 | A0A1E3BP59 | A0A1E3BFQ9 | Histidine--tRNA ligase. | Valine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.754 |
SI65_00343 | SI65_05917 | A0A1E3BP59 | A0A1E3BE97 | Histidine--tRNA ligase. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.493 |
SI65_00343 | SI65_06605 | A0A1E3BP59 | A0A1E3BA47 | Histidine--tRNA ligase. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. | 0.445 |
SI65_00343 | SI65_06894 | A0A1E3BP59 | A0A1E3BCI6 | Histidine--tRNA ligase. | GMP synthase [glutamine-hydrolyzing]. | 0.439 |
SI65_01366 | SI65_00343 | A0A1E3BSC6 | A0A1E3BP59 | AA_TRNA_LIGASE_II domain-containing protein. | Histidine--tRNA ligase. | 0.871 |
SI65_01366 | SI65_02975 | A0A1E3BSC6 | A0A1E3BMG7 | AA_TRNA_LIGASE_II domain-containing protein. | Uncharacterized protein. | 0.858 |
SI65_01366 | SI65_04486 | A0A1E3BSC6 | A0A1E3BEW3 | AA_TRNA_LIGASE_II domain-containing protein. | Protein kinase domain-containing protein. | 0.858 |
SI65_01366 | SI65_04521 | A0A1E3BSC6 | A0A1E3BF33 | AA_TRNA_LIGASE_II domain-containing protein. | tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.867 |
SI65_01366 | SI65_04779 | A0A1E3BSC6 | A0A1E3BFQ9 | AA_TRNA_LIGASE_II domain-containing protein. | Valine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.935 |
SI65_01366 | SI65_05599 | A0A1E3BSC6 | A0A1E3BDD3 | AA_TRNA_LIGASE_II domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.934 |
SI65_01366 | SI65_05917 | A0A1E3BSC6 | A0A1E3BE97 | AA_TRNA_LIGASE_II domain-containing protein. | Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily. | 0.998 |
SI65_01366 | SI65_06605 | A0A1E3BSC6 | A0A1E3BA47 | AA_TRNA_LIGASE_II domain-containing protein. | CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. | 0.935 |
SI65_01366 | SI65_06894 | A0A1E3BSC6 | A0A1E3BCI6 | AA_TRNA_LIGASE_II domain-containing protein. | GMP synthase [glutamine-hydrolyzing]. | 0.907 |
SI65_01366 | SI65_09221 | A0A1E3BSC6 | A0A1E3B2U7 | AA_TRNA_LIGASE_II domain-containing protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.934 |
SI65_02975 | SI65_00343 | A0A1E3BMG7 | A0A1E3BP59 | Uncharacterized protein. | Histidine--tRNA ligase. | 0.814 |
SI65_02975 | SI65_01366 | A0A1E3BMG7 | A0A1E3BSC6 | Uncharacterized protein. | AA_TRNA_LIGASE_II domain-containing protein. | 0.858 |
page 1 of 5