STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SI65_01736Uncharacterized protein. (598 aa)    
Predicted Functional Partners:
SI65_03033
Ankyrin repeat protein nuc-2.
    
  0.586
SI65_06720
Uncharacterized protein.
    
  0.583
SI65_06370
60S ribosomal protein L21-A.
   
   0.576
SI65_00995
60S ribosomal protein L16.
   
   0.550
SI65_05501
26S proteasome regulatory subunit rpn11.
    
  0.502
SI65_00275
Ribosomal_L2_C domain-containing protein.
   
 
 0.487
SI65_01515
Ubiquitin-like domain-containing protein.
    
  0.485
SI65_03105
60S ribosomal protein L39.
   
   0.482
SI65_03130
60S ribosomal protein L2.
   
   0.481
SI65_08009
54S ribosomal protein L23, mitochondrial.
   
   0.473
Your Current Organism:
Aspergillus cristatus
NCBI taxonomy Id: 573508
Other names: A. cristatus, ATCC 16468, Aspergillus cristatellus, CBS 123.53, Eurotium cristatum, IMI 172278, IMI 172280, NRRL 4222
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.