Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEI36832.1Conserved hypothetical protein. (126 aa)    
Predicted Functional Partners:
AEI36841.1
Uncharacterized protein ImpC.
 
    0.857
AEI36842.1
Uncharacterized protein ImpB.
 
    0.853
AEI36836.1
Hypothetical protein.
       0.776
AEI36833.1
Hypothetical protein.
       0.773
AEI36835.1
Hypothetical protein.
  
    0.771
AEI36834.1
Hypothetical protein.
       0.762
AEI36837.1
Hypothetical protein.
       0.762
AEI36838.1
Hypothetical protein.
       0.727
AEI35930.1
Uncharacterized protein ImpC.
 
    0.719
AEI35929.1
Uncharacterized protein ImpB.
 
    0.706
Your Current Organism:
Francisella salina
NCBI taxonomy Id: 573569
Other names: F. salina, Francisella sp. TX077308, strain TX07-7308
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