STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API86718.1D-mannonate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family. (490 aa)    
Predicted Functional Partners:
API86714.1
Glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.996
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 
 0.995
API86716.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.920
API86715.1
4-hydroxy-2-ketovalerate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.879
API86719.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
 
   
 0.851
API86720.1
Rhamnogalacturonide transporter RhiT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.816
API86713.1
Sugar:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
       0.752
API86712.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.694
API87768.1
Sugar:cation symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.442
API86659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.409
Your Current Organism:
Francisella uliginis
NCBI taxonomy Id: 573570
Other names: F. uliginis, Francisella sp. TX077310, strain TX07-7310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.