STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
API87552.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
API86659.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.551
API87551.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.516
API86785.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.483
API87550.1
Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.
  
    0.483
API86462.1
Murein transglycosylase; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.
  
   
 0.474
API87464.1
N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.456
API86012.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.447
API86792.1
Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.410
Your Current Organism:
Francisella uliginis
NCBI taxonomy Id: 573570
Other names: F. uliginis, Francisella sp. TX077310, strain TX07-7310
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.