STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rlmLUnannotated protein; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. (701 aa)    
Predicted Functional Partners:
GCA_001598715_01211
Unannotated protein.
 
  
 0.875
GCA_001598715_01208
Unannotated protein.
       0.776
yebS_2
Unannotated protein.
       0.776
pqiB_1
Unannotated protein.
       0.775
uppS
Unannotated protein.
   
    0.635
ycbX_1
Unannotated protein.
     
 0.630
rsmF_2
Unannotated protein.
  
  
 0.626
pnp
Unannotated protein; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
  
    0.598
thiI
Unannotated protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
 
  
 0.584
birA_1
Unannotated protein.
  
    0.563
Your Current Organism:
Klebsiella pneumoniae ozaenae
NCBI taxonomy Id: 1218098
Other names: K. pneumoniae subsp. ozaenae NBRC 105683, Klebsiella pneumoniae subsp. ozaenae NBRC 105683
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.