STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL11619.1SCP-like extracellular; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: sth:STH564 hypothetical protein; PFAM: SCP-like extracellular; SPTR: C0GJB8 SCP-like extracellular; PFAM: Cysteine-rich secretory protein family; TIGRFAM: uncharacterized protein, YkwD family. (254 aa)    
Predicted Functional Partners:
ADL11618.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: B3KA02 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
 
  
 0.520
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.