STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL12254.1ABC-1 domain protein; COGs: COG0661 unusual protein kinase; InterPro IPR004147:IPR002575:IPR011009; KEGG: hor:Hore_12230 2-octaprenylphenol hydroxylase; PFAM: ABC-1 domain protein; aminoglycoside phosphotransferase; SPTR: B8CXF4 2-octaprenylphenol hydroxylase; PFAM: Phosphotransferase enzyme family; ABC1 family. (559 aa)    
Predicted Functional Partners:
ADL12252.1
KEGG: hor:Hore_12240 hypothetical protein; SPTR: B8CXF5 Uncharacterized conserved protein.
 
     0.845
ADL12255.1
KEGG: hor:Hore_12220 uncharacterized integral membrane protein; SPTR: B8CXF3 Uncharacterized integral membrane protein; PFAM: Protein of unknown function (DUF1049).
       0.759
ADL12253.1
Protein of unknown function DUF456; InterPro IPR007403; KEGG: swo:Swol_1006 hypothetical protein; PFAM: protein of unknown function DUF456; SPTR: Q0AY84 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF456).
       0.746
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
       0.700
ADL12256.1
single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterProIPR001667:IPR003156:IPR014905:IPR011545:IPR 001650:IPR014021:IPR014001:IPR004610; KEGG: cdf:CD2746 putative single-stranded-DNA-specific exonuclease; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; HIRAN; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Q183I1 Putative single-stranded-DNA-specific exonuclease; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: DHHA1 domain; DH [...]
 
    0.671
ADL12258.1
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
  
    0.646
secF
Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.610
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
       0.608
dtd
D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.
       0.562
ADL12260.1
Beta-lactamase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: mta:Moth_1678 beta-lactamase-like; SPTR: Q2RHV9 Beta-lactamase-like; PFAM: Metallo-beta-lactamase superfamily.
   
 
 0.512
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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