Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADL12345.1KEGG: nth:Nther_0724 hypothetical protein; SPTR: B2A7C0 Putative uncharacterized protein. (84 aa)    
Predicted Functional Partners:
ADL12344.1
Hypothetical protein; InterPro IPR012347:IPR009078; KEGG: aoe:Clos_1705 hypothetical protein; SPTR: A8MGM2 Putative uncharacterized protein; PFAM: Domain of unknown function (DUF2383).
       0.485
ADL12346.1
Transposase, IS605 OrfB family; COGs: COG0675 Transposase and inactivated derivatives; InterPro IPR010095; KEGG: tex:Teth514_2350 IS605 family transposase OrfB; PFAM: transposase IS605 OrfB; SPTR: B0P1C0 Putative uncharacterized protein; TIGRFAM: transposase, IS605 OrfB family; PFAM: Putative transposase DNA-binding domain; Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region.
       0.451
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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