node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL12488.1 | mutS2 | Acear_0958 | Acear_0403 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.752 |
ADL12488.1 | rplB | Acear_0958 | Acear_0165 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.742 |
ADL12488.1 | rplE | Acear_0958 | Acear_0174 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.745 |
ADL12488.1 | rplF | Acear_0958 | Acear_0177 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.743 |
ADL12488.1 | rplK | Acear_0958 | Acear_0151 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.742 |
ADL12488.1 | rplM | Acear_0958 | Acear_0195 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.745 |
ADL12488.1 | rplN | Acear_0958 | Acear_0172 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.740 |
ADL12488.1 | rplR | Acear_0958 | Acear_0178 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.742 |
ADL12488.1 | rplV | Acear_0958 | Acear_0167 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.740 |
ADL12488.1 | rplW | Acear_0958 | Acear_0164 | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.741 |
mutS2 | ADL12488.1 | Acear_0403 | Acear_0958 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | 0.752 |
mutS2 | rplB | Acear_0403 | Acear_0165 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.563 |
mutS2 | rplE | Acear_0403 | Acear_0174 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.563 |
mutS2 | rplF | Acear_0403 | Acear_0177 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.563 |
mutS2 | rplM | Acear_0403 | Acear_0195 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.563 |
mutS2 | rplN | Acear_0403 | Acear_0172 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.563 |
mutS2 | rplR | Acear_0403 | Acear_0178 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.563 |
mutS2 | rplV | Acear_0403 | Acear_0167 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome. | 0.563 |
mutS2 | rplW | Acear_0403 | Acear_0164 | MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.563 |
rplB | ADL12488.1 | Acear_0165 | Acear_0958 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR010979:IPR008616:IPR008532; KEGG: hor:Hore_09780 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; SPTR: B8CWR5 Fibronectin-binding A domain protein; PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA). | 0.742 |