STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL12714.1YheO domain protein; COGs: COG2964 conserved hypothetical protein; InterPro IPR013559; KEGG: drm:Dred_1367 YheO domain-containing protein; PFAM: YheO domain protein; SPTR: A4J495 YheO domain protein; PFAM: YheO-like PAS domain. (222 aa)    
Predicted Functional Partners:
ADL12713.1
Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR019897:IPR013813:IPR006175; KEGG: cdf:CD2513 putative translation inhibitor endoribonuclease; PFAM: Endoribonuclease L-PSP; SPTR: Q182K0 Putative translation inhibitor endoribonuclease; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative.
  
  
 0.711
ADL12717.1
COGs: COG1760 L-serine deaminase; InterPro IPR004643:IPR005131:IPR002912; KEGG: cpf:CPF_2959 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein; PRIAM: L-serine ammonia-lyase; SPTR: Q8XH62 Probable L-serine dehydratase beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit.
 
    0.674
ADL12716.1
COGs: COG1760 L-serine deaminase; InterPro IPR004642:IPR005130; KEGG: amt:Amet_2318 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; PRIAM: L-serine ammonia-lyase; SPTR: A6TQK7 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit.
 
    0.671
ADL12715.1
Transporter, NhaC family (TC 2.A.35); COGs: COG1757 Na+/H+ antiporter; InterPro IPR018461; KEGG: hla:Hlac_0614 Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: A6CJY8 Na+/H+ antiporter; PFAM: Na+/H+ antiporter family.
       0.547
ADL12710.1
KEGG: cdf:CD0529 hypothetical protein; SPTR: Q188X6 Putative membrane protein.
 
     0.459
ADL12711.1
KEGG: cdf:CD0530 hypothetical protein; SPTR: C0D1D8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3100).
 
     0.458
ADL12712.1
Amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR017144:IPR011650:IPR002933; KEGG: cdf:CD0528 putative amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; SPTR: Q188X2 Putative amidohydrolase; TIGRFAM: amidohydrolase; PFAM: Peptidase dimerisation domain; TIGRFAM: amidohydrolase; Belongs to the peptidase M20A family.
       0.409
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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