STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL12754.1COGs: COG1600 Uncharacterized Fe-S protein; KEGG: dau:Daud_0137 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; SPTR: B1I0Y2 4Fe-4S ferredoxin, iron-sulfur binding domain protein. (253 aa)    
Predicted Functional Partners:
ADL12755.1
Hypothetical protein.
       0.705
ADL12756.1
Hypothetical protein.
       0.637
ADL12757.1
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.569
queA
S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).
    
 0.558
ADL12758.1
Peptidase M48 Ste24p; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: aba:Acid345_0572 STE24 endopeptidase; PFAM: peptidase M48 Ste24p; SPTR: A8CTF2 Ste24 endopeptidase; PFAM: Peptidase family M48.
       0.533
ADL12993.1
KEGG: dae:Dtox_1693 hypothetical protein; SPTR: C1T9S3 Putative uncharacterized protein.
  
     0.499
ADL12759.1
Peptidase U32; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: cth:Cthe_2086 peptidase U32; PFAM: peptidase U32; SPTR: C7HE01 Peptidase U32; PFAM: Collagenase; Peptidase family U32.
  
    0.485
ADL13033.1
KEGG: dae:Dtox_1693 hypothetical protein; SPTR: C1T9S3 Putative uncharacterized protein.
  
     0.421
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.