STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL13446.1Spore germination protein; InterPro IPR004761; KEGG: dsy:DSY1191 hypothetical protein; PFAM: Spore germination protein; SPTR: Q24YB2 Putative uncharacterized protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease). (361 aa)    
Predicted Functional Partners:
ADL13447.1
InterPro IPR008844; KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Q24NX6 Putative uncharacterized protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
 0.950
ADL13445.1
InterPro IPR004995; KEGG: mta:Moth_2042 GerA spore germination protein; PFAM: GerA spore germination protein; SPTR: Q2RGV1 GerA spore germination protein; PFAM: Bacillus/Clostridium GerA spore germination protein.
 
  
 0.946
ADL13052.1
InterPro IPR008844; KEGG: nth:Nther_0875 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: B2A894 Germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
 0.792
ADL13444.1
Germination protein, Ger(x)C family; InterPro IPR008844; KEGG: amt:Amet_0872 spore germination B3 GerAC family protein; PFAM: spore germination B3 GerAC family protein; SPTR: A6TLM9 Spore germination B3 GerAC family protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
 
  
 0.792
ADL13503.1
InterPro IPR008844; KEGG: cac:CA_P0019 spore germination protein, GrkC; PFAM: spore germination B3 GerAC family protein; SPTR: Q97TS8 Spore germination protein, GRKC; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
 
  
 0.792
ADL13571.1
InterPro IPR008844; KEGG: dhd:Dhaf_0845 germination protein, Ger(X)C family; PFAM: spore germination B3 GerAC family protein; SPTR: Q24NX6 Putative uncharacterized protein; TIGRFAM: germination protein, Ger(x)C family; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
 0.792
ADL13572.1
InterPro IPR004995; KEGG: cac:CA_P0020 spore germination protein, GrkA; PFAM: GerA spore germination protein; SPTR: Q97TS7 Spore germination protein, GRKA; PFAM: Bacillus/Clostridium GerA spore germination protein.
 
  
 0.779
ADL13049.1
GerA spore germination protein; InterPro IPR004995; KEGG: pth:PTH_1840 hypothetical protein; PFAM: GerA spore germination protein; SPTR: A5D162 Hypothetical membrane protein; PFAM: Bacillus/Clostridium GerA spore germination protein.
 
  
 0.768
ADL13217.1
Stage II sporulation protein M; COGs: COG1300 membrane protein; InterPro IPR014196:IPR002798; KEGG: hor:Hore_06860 sporulation stage II protein M; PFAM: protein of unknown function DUF95 transmembrane; SPTR: B8CVX4 Sporulation stage II protein M; TIGRFAM: stage II sporulation protein M; PFAM: Integral membrane protein DUF95; TIGRFAM: stage II sporulation protein M.
  
     0.748
ADL13256.1
InterPro IPR014198; KEGG: dae:Dtox_2610 stage III sporulation protein SpoAB; PFAM: Sporulation stage III protein AB; SPTR: A5D344 Hypothetical membrane protein; TIGRFAM: stage III sporulation protein AB; PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
  
     0.742
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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