STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL13627.1Lipopolysaccharide biosynthesis protein; COGs: COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis; InterPro IPR003856; KEGG: hor:Hore_22220 lipopolysaccharide biosynthesis protein; PFAM: lipopolysaccharide biosynthesis protein; SPTR: B8D0N1 Lipopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily. (503 aa)    
Predicted Functional Partners:
ADL13626.1
Capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702; KEGG: dae:Dtox_4107 capsular exopolysaccharide family; PRIAM: Non-specific protein-tyrosine kinase; SPTR: C1TDD4 Capsular exopolysaccharide biosynthesis protein; TIGRFAM: capsular exopolysaccharide family; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
  
 0.995
ADL13628.1
Polysaccharide export protein; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: geo:Geob_3002 polysaccharide export protein; PFAM: polysaccharide export protein; Soluble ligand binding domain; SPTR: A7BZP7 Apsular polysaccharide export protein; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
 
 
 0.994
ADL13625.1
Protein-tyrosine-phosphatase; COGs: COG4464 Capsular polysaccharide biosynthesis protein; InterPro IPR004013:IPR016195:IPR016667; KEGG: cbt:CLH_3211 putative tyrosine-protein phosphatase CapC; PFAM: PHP domain protein; PRIAM: Protein-tyrosine-phosphatase; SPTR: B2V0U7 Exopolysaccharide biosynthesis protein; PFAM: PHP domain.
 
   
 0.914
ADL13603.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; COGs: COG1045 Serine acetyltransferase; InterProIPR020019:IPR018357:IPR001451:IPR011004:IPR 016040; KEGG: mbu:Mbur_1588 hexapaptide repeat-containing transferase; SPTR: Q12VN4 Protein with transferase hexapeptide repeat domains; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family; PFAM: CoA binding domain; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
  
 0.777
ADL13624.1
Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: hor:Hore_22910 undecaprenyl-phosphate galactose phosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: B8D184 Undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase.
 
  
 0.744
ADL11618.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: asa:ASA_1441 glycosyl transferase, group 2 family protein; PFAM: glycosyl transferase family 2; SPTR: B3KA02 Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
  
 0.684
ADL11861.1
Nucleotidyl transferase; COGs: COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon); InterProIPR016055:IPR011004:IPR005835:IPR001451:IPR 005844; KEGG: hor:Hore_15980 phosphoglucomutase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; SPTR: B8CYH8 Phosphoglucomutase; PFAM: Nucleotidyl transferase; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
  
  
 0.601
ADL13601.1
Polysaccharide biosynthesis protein CapD; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869:IPR016040; KEGG: cno:NT01CX_1779 polysaccharide biosynthesis family protein; PFAM: polysaccharide biosynthesis protein CapD; SPTR: A0PZQ0 Polysaccharide biosynthesis protein superfamily; PFAM: Polysaccharide biosynthesis protein.
 
  
 0.591
ADL13629.1
Hypothetical protein.
       0.528
ADL13604.1
Undecaprenyl-phosphate galactose phosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: pth:PTH_1100 sugar transferases; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Q1ZRK7 Sugar transferase involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase.
 
  
 0.519
Your Current Organism:
Acetohalobium arabaticum
NCBI taxonomy Id: 574087
Other names: A. arabaticum DSM 5501, Acetohalobium arabaticum DSM 5501, Acetohalobium arabaticum str. DSM 5501, Acetohalobium arabaticum strain DSM 5501
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