STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW13896.1Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (377 aa)    
Predicted Functional Partners:
SDW13790.1
Spermidine/putrescine transport system permease protein.
 
 0.988
SDW13839.1
Spermidine/putrescine transport system permease protein.
 0.988
SDW13738.1
Spermidine/putrescine transport system substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.
 
 0.977
SDW03608.1
Spermidine/putrescine transport system permease protein.
 0.944
SDW03657.1
Spermidine/putrescine transport system permease protein.
 
 0.931
SDY00770.1
Putative spermidine/putrescine transport system permease protein.
 
 0.924
SDY00726.1
Putative spermidine/putrescine transport system permease protein.
 0.906
SDY02283.1
ATP-binding cassette, subfamily C, CydC.
 
    
0.868
SDW03555.1
Spermidine/putrescine transport system substrate-binding protein.
 
 0.840
SDW31943.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  0.749
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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