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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW20455.1Copper resistance protein B. (255 aa)    
Predicted Functional Partners:
SDW20522.1
Copper-resistance protein, CopA family.
  
 0.998
SDW20676.1
Uncharacterized copper-binding protein, cupredoxin-like subfamily.
 
  
 0.907
SDW20573.1
Signal transduction histidine kinase.
 
     0.742
SDW20624.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
   
 0.652
SDW20358.1
Cu+-exporting ATPase.
     
 0.485
SDW05696.1
Uncharacterized conserved protein.
     0.483
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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