STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW20788.1Transcriptional regulator, LacI family. (327 aa)    
Predicted Functional Partners:
SDW30900.1
Phosphocarrier protein HPr; Belongs to the PEP-utilizing enzyme family.
 
 
 
 0.935
SDW66182.1
Glutamate synthase (NADPH) large subunit.
    
 
 0.843
SDX64343.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.843
SDW28143.1
DNA-binding transcriptional regulator, LacI/PurR family.
  
     0.771
SDW20835.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
     0.473
SDW21035.1
Type I phosphodiesterase / nucleotide pyrophosphatase.
 
     0.428
SDW63296.1
Transcriptional regulator, GntR family.
  
     0.419
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.