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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW27028.1Beta-ketoacyl synthase, N-terminal domain. (225 aa)    
Predicted Functional Partners:
SDW27083.1
Acyl carrier protein.
 
 0.979
SDW27513.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
   0.979
SDW27163.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 0.973
SDW27612.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
  0.933
SDW27122.1
Uncharacterized membrane protein.
 
   
 0.912
SDW27251.1
Predicted acyltransferase, LPLAT superfamily.
 
     0.909
SDW27432.1
Dehydrogenase (flavoprotein).
 
   
 0.908
SDW27554.1
Predicted 3-hydroxylacyl-ACP dehydratase, HotDog domain.
 
  
 0.907
SDW27206.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.903
SDW27340.1
Hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
  
 0.899
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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