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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW27083.1Acyl carrier protein. (87 aa)    
Predicted Functional Partners:
SDW53157.1
NAD-dependent formate dehydrogenase flavoprotein subunit.
  
 0.999
SDW27163.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
 
 0.997
SDW27513.1
3-oxoacyl-[acyl-carrier-protein] synthase-1; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.989
SDW08322.1
[Acyl-carrier-protein] S-malonyltransferase.
  
 0.988
SDW27028.1
Beta-ketoacyl synthase, N-terminal domain.
 
 0.979
rplU
LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
   
 
 0.965
rpmF
LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.
  
   0.952
SDW27251.1
Predicted acyltransferase, LPLAT superfamily.
 
  
 0.949
SDW27122.1
Uncharacterized membrane protein.
 
     0.947
rplM
LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
   
   0.944
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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