STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW02856.1Ribosomal protein S12 methylthiotransferase accessory factor. (730 aa)    
Predicted Functional Partners:
SDW62095.1
Hypothetical protein.
  
  
 0.837
SDW91509.1
cob(II)yrinic acid a,c-diamide reductase.
  
  
 0.707
SDX80639.1
Nitroreductase.
  
  
 0.707
SDX76451.1
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
  
 0.707
SDX13818.1
ABC-2 type transport system permease protein.
  
  
 0.636
SDX61012.1
ABC-2 type transport system permease protein.
  
  
 0.636
SDX80571.1
ABC-2 type transport system permease protein.
  
  
 0.636
thiI
[ThiS-adenylate] sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
  
  
 0.571
SDW14052.1
Adenylyltransferase and sulfurtransferase.
     
 0.563
SDW02893.1
Hypothetical protein.
       0.491
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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