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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW06918.1sigma-E factor negative regulatory protein RseA. (247 aa)    
Predicted Functional Partners:
SDW06851.1
Sigma E regulatory protein, MucB/RseB.
 
 
 0.998
SDW06967.1
RNA polymerase, sigma-24 subunit, RpoE; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.981
SDW06729.1
Serine protease Do; Belongs to the peptidase S1C family.
  
 
 0.964
SDW28418.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.952
SDW30227.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
 
 0.926
SDX21784.1
Protein of unknown function.
  
 
 0.926
SDW04991.1
Hypothetical protein.
  
 
 0.920
SDW11386.1
Serine protease DegS; Belongs to the peptidase S1C family.
  
 
 0.887
SDW06779.1
Positive regulator of sigma(E), RseC/MucC.
  
  
 0.874
SDW59859.1
Bifunctional DNase/RNase.
  
 
 0.874
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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