STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW53500.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (261 aa)    
Predicted Functional Partners:
SDX64089.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.981
SDW04937.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.971
SDX62772.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 0.961
SDX35185.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.931
SDW22155.1
Diguanylate cyclase with PAS/PAC sensor.
 0.920
SDW22214.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
0.912
SDY12496.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.907
SDX60046.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.905
SDY05175.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.905
SDY12589.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.898
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.