STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW53667.1Fe-S oxidoreductase. (662 aa)    
Predicted Functional Partners:
SDW53551.1
Electron transfer flavoprotein beta subunit.
 
  
 0.986
SDW53775.1
Hypothetical protein.
 
    0.972
SDW53604.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
  
 0.969
SDW53726.1
2,4-dienoyl-CoA reductase.
 
 
 0.965
SDW52750.1
Ferredoxin-NADP reductase.
 
  
 0.910
SDW66182.1
Glutamate synthase (NADPH) large subunit.
    
  0.904
SDX64343.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.904
SDW52470.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
 
 
 0.902
SDW53840.1
Membrane dipeptidase.
 
    0.894
SDW52807.1
Rieske 2Fe-2S family protein.
 
  
 0.859
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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