Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW48427.1 | SDW48471.1 | SAMN05443545_10214 | SAMN05443545_10215 | Phospholipase/carboxylesterase. | Murein L,D-transpeptidase YcbB/YkuD. | 0.570 |
SDW48427.1 | SDW48517.1 | SAMN05443545_10214 | SAMN05443545_10216 | Phospholipase/carboxylesterase. | L,D-transpeptidase catalytic domain. | 0.413 |
SDW48427.1 | SDW48562.1 | SAMN05443545_10214 | SAMN05443545_10217 | Phospholipase/carboxylesterase. | Hypothetical protein. | 0.401 |
SDW48471.1 | SDW48427.1 | SAMN05443545_10215 | SAMN05443545_10214 | Murein L,D-transpeptidase YcbB/YkuD. | Phospholipase/carboxylesterase. | 0.570 |
SDW48471.1 | SDW48517.1 | SAMN05443545_10215 | SAMN05443545_10216 | Murein L,D-transpeptidase YcbB/YkuD. | L,D-transpeptidase catalytic domain. | 0.879 |
SDW48471.1 | SDW48562.1 | SAMN05443545_10215 | SAMN05443545_10217 | Murein L,D-transpeptidase YcbB/YkuD. | Hypothetical protein. | 0.526 |
SDW48517.1 | SDW48427.1 | SAMN05443545_10216 | SAMN05443545_10214 | L,D-transpeptidase catalytic domain. | Phospholipase/carboxylesterase. | 0.413 |
SDW48517.1 | SDW48471.1 | SAMN05443545_10216 | SAMN05443545_10215 | L,D-transpeptidase catalytic domain. | Murein L,D-transpeptidase YcbB/YkuD. | 0.879 |
SDW48517.1 | SDW48562.1 | SAMN05443545_10216 | SAMN05443545_10217 | L,D-transpeptidase catalytic domain. | Hypothetical protein. | 0.757 |
SDW48517.1 | SDW48608.1 | SAMN05443545_10216 | SAMN05443545_10218 | L,D-transpeptidase catalytic domain. | Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family. | 0.521 |
SDW48517.1 | SDX85209.1 | SAMN05443545_10216 | SAMN05443545_107331 | L,D-transpeptidase catalytic domain. | Uncharacterized membrane protein YkvA, DUF1232 family. | 0.440 |
SDW48562.1 | SDW48427.1 | SAMN05443545_10217 | SAMN05443545_10214 | Hypothetical protein. | Phospholipase/carboxylesterase. | 0.401 |
SDW48562.1 | SDW48471.1 | SAMN05443545_10217 | SAMN05443545_10215 | Hypothetical protein. | Murein L,D-transpeptidase YcbB/YkuD. | 0.526 |
SDW48562.1 | SDW48517.1 | SAMN05443545_10217 | SAMN05443545_10216 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.757 |
SDW48562.1 | SDW48608.1 | SAMN05443545_10217 | SAMN05443545_10218 | Hypothetical protein. | Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family. | 0.601 |
SDW48608.1 | SDW48517.1 | SAMN05443545_10218 | SAMN05443545_10216 | Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family. | L,D-transpeptidase catalytic domain. | 0.521 |
SDW48608.1 | SDW48562.1 | SAMN05443545_10218 | SAMN05443545_10217 | Glutamate synthase domain-containing protein 2; Belongs to the glutamate synthase family. | Hypothetical protein. | 0.601 |
SDX85209.1 | SDW48517.1 | SAMN05443545_107331 | SAMN05443545_10216 | Uncharacterized membrane protein YkvA, DUF1232 family. | L,D-transpeptidase catalytic domain. | 0.440 |