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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW70580.1Ribosomal-protein-alanine N-acetyltransferase. (158 aa)    
Predicted Functional Partners:
SDW70685.1
Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family.
       0.808
SDW70633.1
Hypothetical protein.
       0.791
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
 0.735
SDW70739.1
MFS transporter, DHA2 family, multidrug resistance protein.
       0.680
SDW58036.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
 
 
 0.543
SDW13292.1
Transcriptional regulator, XRE family with cupin sensor.
   
 
 0.537
SDX36199.1
Transcriptional regulator, XRE family with cupin sensor.
   
 
 0.537
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.469
SDX32360.1
Chorismate mutase.
 
  
  0.428
SDW70789.1
Hypothetical protein.
       0.424
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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