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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW71987.1Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family. (228 aa)    
Predicted Functional Partners:
SDW72046.1
Secreted Zn-dependent peptidases, insulinase-like; Belongs to the peptidase M16 family.
      0.845
SDW71932.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.624
SDW71878.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.589
SDW19062.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
   
  
 0.572
xerD
Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.558
SDX22221.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
   
    0.558
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
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