STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW83399.1TRAP-type C4-dicarboxylate transport system, small permease component. (162 aa)    
Predicted Functional Partners:
ddpX
D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide.
 
     0.929
SDW83449.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
    0.929
SDW83350.1
TRAP transporter, DctM subunit.
 
  0.908
SDW83490.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.839
SDW31418.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.587
SDW83535.1
Ribonucleoside-diphosphate reductase alpha chain.
 
     0.565
SDW31340.1
TRAP transporter, DctM subunit.
  
  0.559
SDX93494.1
TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.541
SDX67488.1
Protein of unknown function.
  
     0.526
SDX80908.1
SpoIIAA-like.
  
     0.523
Your Current Organism:
Aidingimonas halophila
NCBI taxonomy Id: 574349
Other names: A. halophila, Aidingimonas halophila Wang et al. 2009, CCTCC AB 207002, Chromohalobacter sp. BH017, DSM 19219, KCTC 12885, Modicisalibacter sp. YIM 90637, YIM 90637
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.